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KMID : 0364820190550040459
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Korean Journal of Microbiology
2019 Volume.55 No. 4 p.459 ~ p.461
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Complete genome sequence of Flavisolibacter ginsenosidimutans Gsoil 636 T , a ginsenoside-converting bacterium, isolated from soil used for cultivating ginseng
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Keum Dong-Ho
Lee Byoung-Hee
Lee Ki-Eun
Lee Soon-Youl
Im Wan-Taek
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Abstract
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A yellow-colored, circular, convex, rod-shaped baterial strain designated Flavisolibacter ginsenosidimutans Gsoil 636 T was isolated from soil of a ginseng cultivation field in Pocheon Province, South Korea. Gsoil 636 T showed the ability to convert Rb1 (one of the dominant active components of ginseng) to F2, and its whole genome was sequenced. The whole genome of Flavisolibacter ginsenosidimutans Gsoil 636 T consist of a single circular chromosome of 5,079,621 bp, with 48.9% G + C content. Of the 4,338 predicted genes, 4,251 were proteincording genes, 46 were RNAs, and 41 were pseudogenes. Using the complete genome sequence of the strain Gsoil 636 T , we identified several glycoside hydrolase-encoding genes that may be involved in the conversion of major ginsenosides into minor ginsenosides and unexpectedly found antibiotic biosynthesis- encoding genes and excinuclease genes.
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KEYWORD
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Flavisolibacter ginsenosidimutans, complete genome, ginseng soil, glycoside hydrolase, PacBio RS II
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